Data
A single-cell atlas of human and mouse white adipose tissue
See the manuscript, here (open access link here).
Genes can be queried in the dataset using the Single Cell Portal.
Serialized objects of the final datasets can be found here (Seurat RDS).
Links to specific clusterings/objects are layed out in the tables below:
Human Data
| Explore Online (SCP) | Description | Number of Cells | Object Download Link |
|---|---|---|---|
| all cells | all human WAT cells | 166,149 | human_all.rds (13.2 GB) |
| adipocytes | adipocyte subclusters | 25,871 | human_adipocytes.rds (2.3 GB) |
| ASPCs | adipose stem and progenitor cell subclusters | 52,482 | human_ASPCs.rds (4.1 GB) |
| mesothelial cells | mesothelial subclusters | 30,482 | human_mesothelium.rds (1.8 GB) |
| vascular cells | vascular subclusters | 22,734 | human_vascular.rds (1.3 GB) |
| immune cells | immune subclusters | 34,268 | human_immune.rds (2.7 GB) |
Mouse Data
| Explore Online (SCP) | Description | Number of Cells | Object Download Link |
|---|---|---|---|
| all cells | all mouse WAT cells | 197,721 | mouse_all.rds (15.2 GB) |
| adipocytes | adipocyte subclusters | 39,934 | mouse_adipocytes.rds (3.3 GB) |
| ASPCs | adipose stem and progenitor cell subclusters | 51,227 | mouse_ASPCs.rds (3.3 GB) |
| mesothelial cells | mesothelial subclusters | 14,947 | mouse_mesothelium.rds (550 MB) |
| vascular cells | vascular subclusters | 7,632 | mouse_vascular.rds (503 MB) |
| immune cells | immune subclusters | 70,547 | mouse_immune.rds (4.2 GB) |